@tclemens23, sorry to hear about your zones not working, and I apologize that it's taken a few days to respond to you here. Have you e-mailed Rachio support? This sounds like something they'll want to help you troubleshoot to determine the cause.
If you have, or could get, a couple photos of your wiring before & after (old Rainbird unit & your new Rachio), please send them in to firstname.lastname@example.org. The more detail you can include in this email the better. Also, please include a phone number if you're willing to troubleshoot over the phone. That may be the fastest way to get you fixed up & watering all your zones for the weekend.
Thanks for your patience; hope to get you watering with Rachio soon!